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No. Author Title Journal
1 T. Endoh, H. Tateishi-Karimata, N. Sugimoto Effects of Molecular Crowding on Structures and Functions of Nucleic Acids. Handbook of Chemical Biology of Nucleic Acids. Springer(2023)
2 S. Ghosh, S. Takahashi, D. Banerjee, T. Ohyama, T. Endoh, H. Tateishi-Karimata, N. Sugimoto Nearest-neighbor parameters for the prediction of RNA duplex stability in diverse in vitro and cellular-like crowding conditions Nucleic Acids Res., , 51, 4101(2023)
3 T. Endoh, S. Takahashi, N. Sugimoto Endogenous G-quadruplex-forming RNAs inhibit the activity of SARS-CoV-2 RNA polymerase Chem. Commun., , 59, 872(2023)
4 T. Endoh, J. H. Tan, S. B. Chen, and N. Sugimoto Cladogenetic Orthogonal Light-Up Aptamers for Simultaneous Detection of Multiple Small Molecules in Cells Anal. Chem.,, 95, 976(2023)
5 Y. Zhang, H. Tateishi-Karimata, T. Endoh, Q. J., Kexin Li, X. Fan, Y. Ma, L. Gao, H. Lu, Z. Wang, A. E. Cho, X. Yao, Ch. Liu, N. Sugimoto, S. Guo, X. Fu, Q. Shen, G. Xu, L. R. Herrera-Estrella, X. Fan High-temperature adaptation of an OsNRT2.3 allele is thermoregulated by small RNAs Science Advances, 8, 9785(2022)
6 S. Satpathi, T. Endoh, and N. Sugimoto Applicability of Nearest-neighbour Model for Pseudoknot RNAs Chem. Commun., 58, 5952-5955 [Selected as an Inside Back Cover](2022)
7 N. Sugimoto, T. Endoh, S. Takahashi, and H. Tateishi-Karimata Chemical Biology of Double Helical and Non-Double Helical Nucleic Acids: “To B or Not To B, That Is the Question” Bull. Chem. Soc. Jpn., 94, 1970-1998(2021)
8 T. Endoh, N. Brodyagin, D. Hnedzko, N. Sugimoto, and E. Rozners Triple-Helical Binding of Peptide Nucleic Acid Inhibits Maturation of Endogenous MicroRNA-197 ACS Chem. Biol., 16, 1147-1151[Selected as a Supplementary Cover](2021)
9 S.Satpathi, T.Endoh, Peter Podbevšek, Janes Plavec, N. Sugimoto Transcriptome screening followed by integrated physicochemical and structural analyses for investigating RNA-mediated berberine activity Nucleic Acids Res, 49, gkab189(2021)
10 Shungo Sakashita, Tamaki Endoh, Arisa Okada, Kenji Usui Construction of gene expression control system using photolabile PNA peptide binding to guanine-rich DNA/RNA Peptide Science, 2019, 107-108(2020)
11 Yuka Kataoka, Hiroto Fujita, Tamaki Endoh, Naoki Sugimoto, Masayasu Kuwahara Effects of Modifying Thioflavin T at the N3-Position on Its G4 Binding and Fluorescence Emission Molecules, 25, 4936 (2020)
12 D. Banerjee, H. Tateishi-Karimata, T. Ohyama, S. Ghosh, T. Endoh, S. Takahashi, N. Sugimoto Improved nearest-neighbor parameters for the stability of RNA/DNA hybrids under a physiological condition Nucleic Acids Res., 48(21), 12042-12054(2020)
13 S. Ghosh, S. Takahashi, T. Ohyama, T. Endoh, H. Tateishi-Karimata, N. Sugimoto Nearest-neighbor parameters for predicting DNA duplex stability in diverse molecular crowding conditions Proc. Natl. Acad. Sci. USA., 117(25), 14194-14201(2020)
14 T. Endoh, N. Sugimoto Signaling Aptamer Optimization through Selection Using RNA-Capturing Microsphere Particles Anal. Chem., 92(11), 7955-7963(2020)
15 T. Endoh and N. Sugimoto Conformational Dynamics of the RNA G-Quadruplex and its Effect on Translation Efficiency Molecules, 24, 1613(2019)
16 T. Endoh, T. Ohyama, and N. Sugimoto RNA-Capturing Microsphere Particles (R-CAMPs) for Optimization of Functional Aptamers Samll, 1805062(2019)
17 S. Ghosh, S. Takahashi, T. Endoh, H. Tateishi-Karimata, S. Hazra, and N. Sugimoto Validation of the Nearest-neighbor Model for Watson–Crick Self-complementary DNA Duplexes in Molecular Crowding Condition Nucleic Acids Res., 47, 3284-3294(2019)
18 T. Endoh and N. Sugimoto Co-Transcriptional Molecular Assembly Results in a Kinetically Controlled Irreversible RNA Conformational Switch Anal. Chem., 99, 11193-11197(2018)
19 A. B. Rode, T. Endoh, and N. Sugimoto Crowding Shifts the FMN Recognition Mechanism of Riboswitch Aptamer from Conformational Selection to Induced Fit Angew. Chem. Int. Ed., 57, 6868-6872(2018)
20 M. Trajkovski, T, Endoh, H. Tateishi-Karimata, T. Ohyama, S. Tanaka, J. Plavec, and N. Sugimoto Pursuing origins of (poly)ethylene glycol-induced G-quadruplex structural modulations Nucleic Acids Res., 46, 4301-4315(2018)
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